Molecular Glues

Home 5 Molecular Glues

From Hit Identification to Preclinical Candidate

Molecular glues represent the next generation of targeted protein degradation (TPD), offering superior drug-like properties compared to bifunctional degraders. These monovalent small molecules act as chemical adhesives, inducing novel protein–protein interactions between E3 ubiquitin ligases and disease-causing targets. Through this mechanism, molecular glue drug discovery enables selective ubiquitination and proteasomal degradation, expanding the scope of druggable proteins and enabling next-gen molecular glue therapeutics.

Targeted protein degradation molecule

Molecular glues are characterized by enhanced oral bioavailability, improved membrane permeability, and potential blood–brain barrier penetration, while maintaining compliance with Lipinski’s Rule of Five due to their lower molecular weight—a key advantage in molecular glue drug discovery. Their simpler chemical synthesis enables clearer structure–activity relationships (SAR) and improved synthetic tractability, supporting efficient molecular glue screening and lead optimization. Clinical validation of this targeted protein degradation approach is demonstrated by FDA-approved IMiDs, including lenalidomide and pomalidomide. This next-generation molecular glue modality enables access to previously undruggable targets, including transcription factors, scaffolding proteins, and neo-substrates.

At PI Health Sciences, our Molecular Glues Discovery Platform integrates hit identification technologies, AI-enabled design, and medicinal chemistry expertise to advance programs from early screening through preclinical candidate nomination. The platform supports molecular glues for targeted protein degradation with an emphasis on drug-like optimization, translational relevance, and IND-enabling readiness.

Hit-to-Candidate Workflow

 

Hit Identification
Hit-to-Lead
Lead Optimization
Candidate Selection
  • Fragment-based
  • AI-driven design
  • Ternary complex formation assays
  • SAR exploration
  • Potency optimization
  • Selectivity profiling
  • Preliminary ADME
  • Structural biology
  • Neo-substrate ID
  • ADME/PK optimization
  • Toxicity assessment
  • In vivo efficacy
  • Formulation dev.
  • Proteomics profiling
  • Biomarker validation
  • GLP toxicology
  • IND-enabling studies
  • CMC development
  • Scale-up synthesis
  • Regulatory strategy
  • IP assessment

E3 Ligase Focus & Validated Targets

 

Ligase E3
Known Neo-Substrates
Therapeutic Areas
CRBN (Cereblon)
Most clinically validated
IKZF1/3, CK1α, GSPT1,
RBM39, SALL4, ZFP91
Multiple myeloma,
AML, MDS, lymphoma,
solid tumors
VHL (Von Hippel-Lindau) HIF1α, BRD4, BTK,
Emerging neo-substrates
Oncology,
inflammatory diseases
MDM2 p53, oncoproteins p53 wild-type cancers
DCAF15 RBM39, RBM23, splicing factors Cancer (breast, ovarian)
Emerging Ligases cIAP1, IAP, KEAP1,
Novel neo-substrates
Various indications

Our Capabilities

 

01

Hit Identification

Fragment-based discovery, focused CRBN-binding libraries, IMiD-derived collections, phenotypic cellular degradation assays, binary complex screening, ternary complex screening, orthogonal confirmation.

02

Medicinal Chemistry Optimization

Hit-to-lead chemistry, SAR exploration, potency tuning, selectivity profiling, scaffold hopping, physicochemical property optimization, stereoselective synthesis, multi-gram scale-up.

03

Computational Design

Generative AI, de novo molecular design, virtual screening, molecular docking, molecular dynamics, ternary complex modeling, protein–protein interaction interface analysis.

04

Cellular Degradation Biology

Ternary complex formation assays, target degradation assessment, DC50 determination, Dmax determination, ubiquitination profiling, E3 ligase engagement studies, cellular target engagement assays.

05

ADME and Pharmacokinetics

In vitro ADME profiling, metabolic stability assessment, CYP screening, plasma protein binding, blood–brain barrier permeability evaluation, in vivo PK studies, tissue distribution analysis.

06

Preclinical Enablement

Exploratory toxicology, GLP toxicology planning, safety pharmacology, in vivo efficacy models, translational biomarker development, CMC development, IND-enabling package preparation.

Frequently asked questions

We’re here to help with any questions you have about our plans, supported features, and how our model works.
What differentiates the PI Health Sciences approach to Molecular glues (MGs)?

The platform integrates screening, computational design, medicinal chemistry, proteomics, ADME, and safety evaluation within a single workflow, enabling structured progression from hit identification to preclinical candidate selection.

How does the platform support Molecular glue optimization beyond hit discovery?

Optimization is driven by SAR, ternary complex stability, degradation kinetics, ADME and PK profiling, and in vivo efficacy data to support rational lead progression.

Which E3 ligases are supported within the platform?

The platform supports CRBN, VHL, MDM2, DCAF15, and emerging ligases, enabling access to a broad range of validated and novel neo-substrates.

How does the platform support progression toward IND-enabling studies?
Candidate selection is supported by integrated PK, safety, toxicology, and CMC planning, enabling alignment with regulatory expectations for preclinical development.

Contact Us

Connect with PI Health Sciences to explore how our customized pharmaceutical development services can streamline your molecule’s journey from concept to market with precision and confidence.